Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548c-3p in CA Bladder Dyrskjot Cluster 36 Table contains all genes in the CA Bladder Dyrskjot cluster number 36. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 84084 RAB6C RAB6C, member RAS oncogene family [Source:HGNC Symbol;Acc:16525] T 55207 ARL8B ADP-ribosylation factor-like 8B [Source:HGNC Symbol;Acc:25564] P T 171392 ZNF675 zinc finger protein 675 [Source:HGNC Symbol;Acc:30768] zzz999 4232 MEST mesoderm specific transcript homolog (mouse) [Source:HGNC Symbol;Acc:7028] zzz999 159 ADSS adenylosuccinate synthase [Source:HGNC Symbol;Acc:292] T 10165 SLC25A13 solute carrier family 25, member 13 (citrin) [Source:HGNC Symbol;Acc:10983] zzz999 23534 TNPO3 transportin 3 [Source:HGNC Symbol;Acc:17103] zzz999 9611 NCOR1 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:7672] T 9184 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) [Source:HGNC Symbol;Acc:1151] P 26354 GNL3 guanine nucleotide binding protein-like 3 (nucleolar) [Source:HGNC Symbol;Acc:29931] T 26608 TBL2 transducin (beta)-like 2 [Source:HGNC Symbol;Acc:11586] T 9913 SUPT7L suppressor of Ty 7 (S. cerevisiae)-like [Source:HGNC Symbol;Acc:30632] T 55830 GLT8D1 glycosyltransferase 8 domain containing 1 [Source:HGNC Symbol;Acc:24870] zzz999 94134 ARHGAP12 Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:16348] P T 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] zzz999 9637 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) [Source:HGNC Symbol;Acc:3660] zzz999 1398 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) [Source:HGNC Symbol;Acc:2362] zzz999 55131 RBM28 RNA binding motif protein 28 [Source:HGNC Symbol;Acc:21863] T 29116 MYLIP myosin regulatory light chain interacting protein [Source:HGNC Symbol;Acc:21155] T 79665 DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Source:HGNC Symbol;Acc:18018] P T 8731 RNMT RNA (guanine-7-) methyltransferase [Source:HGNC Symbol;Acc:10075] T 7072 TIA1 TIA1 cytotoxic granule-associated RNA binding protein [Source:HGNC Symbol;Acc:11802] P T 6419 SETMAR SET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:10762] zzz999 51109 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:17964] zzz999 9188 DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Source:HGNC Symbol;Acc:2744] T 8500 PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:9245] T 8503 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) [Source:HGNC Symbol;Acc:8981] T 79882 ZC3H14 zinc finger CCCH-type containing 14 [Source:HGNC Symbol;Acc:20509] T 80196 RNF34 ring finger protein 34 [Source:HGNC Symbol;Acc:17297] T 9231 DLG5 discs, large homolog 5 (Drosophila) [Source:HGNC Symbol;Acc:2904] zzz999 56180 MOSPD1 motile sperm domain containing 1 [Source:HGNC Symbol;Acc:25235] P T 22794 CASC3 cancer susceptibility candidate 3 [Source:HGNC Symbol;Acc:17040] T 1122 CHML choroideremia-like (Rab escort protein 2) [Source:HGNC Symbol;Acc:1941] T 54708 MARCH5 membrane-associated ring finger (C3HC4) 5 [Source:HGNC Symbol;Acc:26025] P T 10730 YME1L1 YME1-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:12843] zzz999 9852 EPM2AIP1 EPM2A (laforin) interacting protein 1 [Source:HGNC Symbol;Acc:19735] T 10128 LRPPRC leucine-rich PPR-motif containing [Source:HGNC Symbol;Acc:15714] zzz999 6249 CLIP1 CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:10461] P T 5985 RFC5 replication factor C (activator 1) 5, 36.5kDa [Source:HGNC Symbol;Acc:9973] zzz999 114883 OSBPL9 oxysterol binding protein-like 9 [Source:HGNC Symbol;Acc:16386] T 60561 RINT1 RAD50 interactor 1 [Source:HGNC Symbol;Acc:21876] zzz999 6197 RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Source:HGNC Symbol;Acc:10432] T 9943 OXSR1 oxidative-stress responsive 1 [Source:HGNC Symbol;Acc:8508] P T 10499 NCOA2 nuclear receptor coactivator 2 [Source:HGNC Symbol;Acc:7669] P T 3682 ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) [Source:HGNC Symbol;Acc:6147] zzz999 8562 DENR density-regulated protein [Source:HGNC Symbol;Acc:2769] T 4072 EPCAM epithelial cell adhesion molecule [Source:HGNC Symbol;Acc:11529] zzz999 6117 RPA1 replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289] zzz999 163 AP2B1 adaptor-related protein complex 2, beta 1 subunit [Source:HGNC Symbol;Acc:563] T 9749 PHACTR2 phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:20956] T 51031 GLOD4 glyoxalase domain containing 4 [Source:HGNC Symbol;Acc:14111] T 51030 FAM18B1 family with sequence similarity 18, member B1 [Source:HGNC Symbol;Acc:20399] zzz999 81565 NDEL1 nudE nuclear distribution gene E homolog (A. nidulans)-like 1 [Source:HGNC Symbol;Acc:17620] zzz999 55227 LRRC1 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:14307] P T 56950 SMYD2 SET and MYND domain containing 2 [Source:HGNC Symbol;Acc:20982] zzz999 79731 NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:26274] zzz999 6654 SOS1 son of sevenless homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:11187] T 10961 ERP29 endoplasmic reticulum protein 29 [Source:HGNC Symbol;Acc:13799] zzz999 56889 TM9SF3 transmembrane 9 superfamily member 3 [Source:HGNC Symbol;Acc:21529] T 57380 MRS2 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13785] T 9367 RAB9A RAB9A, member RAS oncogene family [Source:HGNC Symbol;Acc:9792] zzz999 10049 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 [Source:HGNC Symbol;Acc:14888] T 55750 AGK acylglycerol kinase [Source:HGNC Symbol;Acc:21869] T 79983 POF1B premature ovarian failure, 1B [Source:HGNC Symbol;Acc:13711] zzz999 5501 PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283] T 64083 GOLPH3 golgi phosphoprotein 3 (coat-protein) [Source:HGNC Symbol;Acc:15452] P T 5001 ORC5 origin recognition complex, subunit 5 [Source:HGNC Symbol;Acc:8491] zzz999 10492 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:16918] T 54977 SLC25A38 solute carrier family 25, member 38 [Source:HGNC Symbol;Acc:26054] zzz999 10793 ZNF273 zinc finger protein 273 [Source:HGNC Symbol;Acc:13067] T 54918 CMTM6 CKLF-like MARVEL transmembrane domain containing 6 [Source:HGNC Symbol;Acc:19177] T 5636 PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:HGNC Symbol;Acc:9467] T 5832 ALDH18A1 aldehyde dehydrogenase 18 family, member A1 [Source:HGNC Symbol;Acc:9722] zzz999 25836 NIPBL Nipped-B homolog (Drosophila) [Source:HGNC Symbol;Acc:28862] T 26268 FBXO9 F-box protein 9 [Source:HGNC Symbol;Acc:13588] T 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] T 9761 MLEC malectin [Source:HGNC Symbol;Acc:28973] T 2332 FMR1 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:3775] T 54477 PLEKHA5 pleckstrin homology domain containing, family A member 5 [Source:HGNC Symbol;Acc:30036] zzz999 23608 MKRN1 makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] T 55100 WDR70 WD repeat domain 70 [Source:HGNC Symbol;Acc:25495] T 23767 FLRT3 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:3762] P T 79443 FYCO1 FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673] T 9988 DMTF1 cyclin D binding myb-like transcription factor 1 [Source:HGNC Symbol;Acc:14603] zzz999 22928 zzz999 zzz999 T 120 ADD3 adducin 3 (gamma) [Source:HGNC Symbol;Acc:245] P T 23271 CAMSAP1L1 calmodulin regulated spectrin-associated protein 1-like 1 [Source:HGNC Symbol;Acc:29188] P T 55149 MTPAP mitochondrial poly(A) polymerase [Source:HGNC Symbol;Acc:25532] T 8027 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:HGNC Symbol;Acc:11357] T 51430 C1orf9 chromosome 1 open reading frame 9 [Source:HGNC Symbol;Acc:1240] T 54680 ZNHIT6 zinc finger, HIT-type containing 6 [Source:HGNC Symbol;Acc:26089] zzz999 25940 FAM98A family with sequence similarity 98, member A [Source:HGNC Symbol;Acc:24520] T 8454 CUL1 cullin 1 [Source:HGNC Symbol;Acc:2551] zzz999 23607 CD2AP CD2-associated protein [Source:HGNC Symbol;Acc:14258] T 8611 PPAP2A phosphatidic acid phosphatase type 2A [Source:HGNC Symbol;Acc:9228] T 1039 CDR2 cerebellar degeneration-related protein 2, 62kDa [Source:HGNC Symbol;Acc:1799] zzz999 28972 SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23401] zzz999 22976 PAXIP1 PAX interacting (with transcription-activation domain) protein 1 [Source:HGNC Symbol;Acc:8624] T 54537 FAM35A family with sequence similarity 35, member A [Source:HGNC Symbol;Acc:28773] T 7718 ZNF165 zinc finger protein 165 [Source:HGNC Symbol;Acc:12953] zzz999 54951 COMMD8 COMM domain containing 8 [Source:HGNC Symbol;Acc:26036] T 51631 LUC7L2 LUC7-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:21608] P T 63892 THADA thyroid adenoma associated [Source:HGNC Symbol;Acc:19217] T 9324 HMGN3 high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:12312] T 9690 UBE3C ubiquitin protein ligase E3C [Source:HGNC Symbol;Acc:16803] T 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] zzz999 80267 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 [Source:HGNC Symbol;Acc:16787] T 64764 CREB3L2 cAMP responsive element binding protein 3-like 2 [Source:HGNC Symbol;Acc:23720] T 23097 CDK19 cyclin-dependent kinase 19 [Source:HGNC Symbol;Acc:19338] T 23395 LARS2 leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:17095] zzz999 757 TMEM50B transmembrane protein 50B [Source:HGNC Symbol;Acc:1280] P T 8772 FADD Fas (TNFRSF6)-associated via death domain [Source:HGNC Symbol;Acc:3573] zzz999 5868 RAB5A RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] T 64400 AKTIP AKT interacting protein [Source:HGNC Symbol;Acc:16710] T 60492 CCDC90B coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:28108] zzz999 6526 SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038] P T 84272 YIPF4 Yip1 domain family, member 4 [Source:HGNC Symbol;Acc:28145] P T 10289 EIF1B eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:30792] zzz999 65084 TMEM135 transmembrane protein 135 [Source:HGNC Symbol;Acc:26167] T 23122 CLASP2 cytoplasmic linker associated protein 2 [Source:HGNC Symbol;Acc:17078] T 7342 UBP1 upstream binding protein 1 (LBP-1a) [Source:HGNC Symbol;Acc:12507] T 2746 GLUD1 glutamate dehydrogenase 1 [Source:HGNC Symbol;Acc:4335] T 51507 C20orf43 chromosome 20 open reading frame 43 [Source:HGNC Symbol;Acc:15890] zzz999 6187 RPS2 ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] zzz999 79670 ZCCHC6 zinc finger, CCHC domain containing 6 [Source:HGNC Symbol;Acc:25817] T 54880 BCOR BCL6 corepressor [Source:HGNC Symbol;Acc:20893] zzz999 10006 ABI1 abl-interactor 1 [Source:HGNC Symbol;Acc:11320] T 58516 FAM60A family with sequence similarity 60, member A [Source:HGNC Symbol;Acc:30702] P T 9950 GOLGA5 golgin A5 [Source:HGNC Symbol;Acc:4428] zzz999 5529 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform [Source:HGNC Symbol;Acc:9313] zzz999 9061 PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:8603] P T 10473 HMGN4 high mobility group nucleosomal binding domain 4 [Source:HGNC Symbol;Acc:4989] T 55754 TMEM30A transmembrane protein 30A [Source:HGNC Symbol;Acc:16667] zzz999 4140 MARK3 MAP/microtubule affinity-regulating kinase 3 [Source:HGNC Symbol;Acc:6897] zzz999 23008 KLHDC10 kelch domain containing 10 [Source:HGNC Symbol;Acc:22194] T 1432 MAPK14 mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:6876] T 901 CCNG2 cyclin G2 [Source:HGNC Symbol;Acc:1593] P T 79692 ZNF322A zinc finger protein 322A [Source:HGNC Symbol;Acc:23640] T 25978 CHMP2B chromatin modifying protein 2B [Source:HGNC Symbol;Acc:24537] T 7374 UNG uracil-DNA glycosylase [Source:HGNC Symbol;Acc:12572] zzz999 7375 USP4 ubiquitin specific peptidase 4 (proto-oncogene) [Source:HGNC Symbol;Acc:12627] T 26225 ARL5A ADP-ribosylation factor-like 5A [Source:HGNC Symbol;Acc:696] T 5870 RAB6A RAB6A, member RAS oncogene family [Source:HGNC Symbol;Acc:9786] T 9557 CHD1L chromodomain helicase DNA binding protein 1-like [Source:HGNC Symbol;Acc:1916] zzz999 7267 TTC3 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:12393] T 4646 MYO6 myosin VI [Source:HGNC Symbol;Acc:7605] T 8315 BRAP BRCA1 associated protein [Source:HGNC Symbol;Acc:1099] zzz999 81790 RNF170 ring finger protein 170 [Source:HGNC Symbol;Acc:25358] zzz999 2720 GLB1 galactosidase, beta 1 [Source:HGNC Symbol;Acc:4298] T 889 KRIT1 KRIT1, ankyrin repeat containing [Source:HGNC Symbol;Acc:1573] T 55602 CDKN2AIP CDKN2A interacting protein [Source:HGNC Symbol;Acc:24325] T 10466 COG5 component of oligomeric golgi complex 5 [Source:HGNC Symbol;Acc:14857] T 29760 BLNK B-cell linker [Source:HGNC Symbol;Acc:14211] T 7779 SLC30A1 solute carrier family 30 (zinc transporter), member 1 [Source:HGNC Symbol;Acc:11012] P T 79161 C7orf23 chromosome 7 open reading frame 23 [Source:HGNC Symbol;Acc:21707] T 3912 LAMB1 laminin, beta 1 [Source:HGNC Symbol;Acc:6486] zzz999 5824 PEX19 peroxisomal biogenesis factor 19 [Source:HGNC Symbol;Acc:9713] T 7050 TGIF1 TGFB-induced factor homeobox 1 [Source:HGNC Symbol;Acc:11776] P T 23256 SCFD1 sec1 family domain containing 1 [Source:HGNC Symbol;Acc:20726] T 57180 ACTR3B ARP3 actin-related protein 3 homolog B (yeast) [Source:HGNC Symbol;Acc:17256] zzz999 51125 GOLGA7 golgin A7 [Source:HGNC Symbol;Acc:24876] T 8453 CUL2 cullin 2 [Source:HGNC Symbol;Acc:2552] zzz999 22908 SACM1L SAC1 suppressor of actin mutations 1-like (yeast) [Source:HGNC Symbol;Acc:17059] zzz999 64924 SLC30A5 solute carrier family 30 (zinc transporter), member 5 [Source:HGNC Symbol;Acc:19089] T 27332 ZNF638 zinc finger protein 638 [Source:HGNC Symbol;Acc:17894] P T 444 ASPH aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:757] T 29969 MDFIC MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:28870] T 23429 RYBP RING1 and YY1 binding protein [Source:HGNC Symbol;Acc:10480] T 10221 TRIB1 tribbles homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:16891] zzz999 10424 PGRMC2 progesterone receptor membrane component 2 [Source:HGNC Symbol;Acc:16089] P T 55145 THAP1 THAP domain containing, apoptosis associated protein 1 [Source:HGNC Symbol;Acc:20856] T

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